Usage

Once installed, import and initialize psico in PyMOL to expose its commands:

import psico.fullinit

You can then use help psico on the PyMOL command line to discover available commands, or search via the apropos helper:

PyMOL> apropos align

To generate a standalone HTML reference of all psico commands from within PyMOL:

import psico.helping as H
H.write_html_ref('psico-commands.html')

Many features require optional Python packages or external command line tools (see README for details). Those are not mandatory for installation but enable additional functionality when present.